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Meal Type » Gluten Free Snacks » Gluten Free Chocolate Muffins

Gluten Free Chocolate Muffins

Claire Cary

By

Claire Cary

5 from 1 vote
May 27, 2024
Jump to Recipe

These gluten free chocolate muffins are moist, tender, with a rich chocolate flavor. They’re made with simple ingredients like oat flour, almond flour, eggs and maple syrup. Perfect for an afternoon pick me up!

gluten free chocolate muffins with a bite taken out

Gluten free chocolate muffins are such a staple recipe, I don’t know why it’s taken me so long to get this recipe up on the blog!

This recipe is rich and fudgy while still being light and fluffy, can be made vegan and refined sugar free! They come together in just about 30 minutes and are perfect for a healthy dessert or snack.

Thanks to the eggs and generous amount of baking powder, these muffins are very light, fluffy and not at all dense like some gluten free muffins. The maple syrup, milk and butter keep them nice and moist without a density.

If you love this recipe, try my protein banana muffins or chocolate banana muffins next!

Why you’ll love this recipe

  • Easy to make- one bowl!
  • Dairy free friendly
  • Simple ingredients
ingredients in bowls with labels

Key ingredients & swaps

ALMOND FLOUR. I love baking with almond flour because it creates such a moist texture thanks to the high fat content. If you prefer a nut free option, you can swap with oat flour, but I would subtract a few minutes of bake time.

OAT FLOUR. Oat flour is naturally gluten free, but be sure to use a certified gluten free oat flour if you have celiac.

CORNSTARCH. Cornstarch will help absorb excess moisture and bind all ingredients together. You can swap for arrowroot or tapioca.

COCOA. Essential for making these gluten free chocolate muffins! Plus the addition of chocolate chips, these are going to be rich and delicious.

BUTTER. I like butter for a richer flavor, but you can swap for coconut oil if you prefer. I suggest refined coconut oil so there is no coconut flavor.

EGGS. Two eggs will help bind all ingredients together. I have not tried a vegan sub, but you can try flax eggs or a store bought egg replacer.

MILK. I used almond milk because that’s what I usually have on hand, but anything goes here!

SUGAR. A mix of granulated sugar and maple syrup will sweeten these right up! I use white sugar, but you can use brown or coconut as well.

two images showing how to make the batter

How to make gluten free chocolate muffins

Preheat the oven to 350 Fahrenheit. Line a 12 cavity muffin tin with liners and set aside.

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In a mixing bowl, whisk together all wet ingredients until combined.

Whisk in the dry ingredients, making sure to spoon and level the flours, but leave aside the chocolate chips for now.

Whisk until smooth. Fold in the chocolate chips.

Scoop the batter into the prepared muffin tin, filling each about 3/4 of the way up. Top with additional chocolate chips if desired.

Bake for 22-28 minutes or until a toothpick comes out clean. Mine are usually perfect around 25 minutes, but all ovens are different. Let cool, then enjoy!

muffin batter in the tin before baking

How to store and freeze

To store: Once prepared, these gluten free chocolate muffins muffins will keep at room temperature for 3-5 days. I like to store them in a container or a ziplock bag to keep them moist.

To freeze: I have not tried freezing them, but I do think that would work well! Be sure to let them cool completely, then transfer to a freezer safe bag and freeze for up to 1 month.

To reheat: If frozen, let the muffins defrost in the fridge, then reheat until warm through the center at 300. If they were simply in the fridge or at room temp, just pop in the microwave for a few seconds to warm them up!

overhead shot of the gluten free chocolate muffins with sea salt on top

Flour tip

The best way to measure gluten free flour is to use the “spoon & level” method. Use a spoon to scoop the flour into a dry measuring cup.  Next, use the back of a knife to level off the top of the measuring cup and remove the excess flour.

Please do not scoop the flour directly out of the bag with your measuring cup as you will end up with much more flour than you really need which will lead to dry muffins.

Tips for perfect muffins

Use room temperature ingredients. Because we are using butter in this recipe, I suggest ensuring all wet ingredients are at room temperature so the melted butter doesn’t harden when it comes into contact with the other wet ingredients.

Keep an eye on bake time. Gluten free baked goods can very easily over bake or under bake. Over-baking can lead to a dry muffin, whereas under-baking will prevent the structure from forming and they can collapse when they cool.

one bite taken out of the gluten free chocolate muffin to show texture

More snack recipes you’ll love!

  • Mini Chocolate Chip Muffins
  • Vegan Protein Bars
  • Protein Chocolate Chip Cookies
  • Gluten Free Banana Bread

If you want more recipes straight to your inbox, be sure to subscribe to my email list. As always, tag me on instagram if you make this recipe so I can see your creation!

5 from 1 vote

Gluten Free Chocolate Muffins

by: claire cary

These gluten free chocolate muffins are moist, tender, with a rich chocolate flavor. They’re made with simple ingredients like oat flour, almond flour, eggs and maple syrup. Perfect for an afternoon pick me up!
/ /
Prep: 10 minutes mins
Cook: 25 minutes mins
Total: 35 minutes mins
12

Ingredients

Wet

  • 2 eggs
  • ⅓ cup butter melted
  • ⅓ cup milk
  • ¼ cup maple syrup
  • ⅔ cup granulated sugar of choice
  • 1 teaspoon vanilla

Dry

  • 1 cup oat flour
  • 1 cup almond flour
  • ½ cup cocoa powder
  • 1 tablespoon cornstarch
  • 1 teaspoon baking powder
  • ¼ teaspoon salt
  • ⅔ cup chocolate chips
US Customary – Metric

Instructions

  • Preheat the oven to 350 Fahrenheit.
  • Line a 12 cavity muffin tin with liners and set aside.
  • In a mixing bowl, whisk together all wet ingredients until combined.
  • Whisk in the dry ingredients, making sure to spoon and level the flours, but leave aside the chocolate chips for now.
  • Whisk until smooth.
  • Fold in the chocolate chips.
  • Scoop the batter into the prepared muffin tin, filling each about 3/4 of the way up.
  • Top with additional chocolate chips if desired.
  • Bake for 22-28 minutes or until a toothpick comes out clean. Mine are usually perfect around 25 minutes, but all ovens are different.
  • Let cool, then enjoy!

Notes

You can swap the butter for refined coconut oil and the milk for any non-dairy milk for a dairy free option.
Serving: 1muffin / Calories: 276kcal / Carbohydrates: 34g / Protein: 6g / Fat: 14g / Fiber: 3g / Sugar: 22g

Did you make this?

Mention @eatwithclarity or tag #eatwithclarity!

Related posts:

  1. Vegan Gluten Free Banana Bread
  2. Oat Flour Pumpkin Bread
  3. Blueberry Protein Donuts
  4. Blueberry Protein Muffins
5 from 1 vote

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Comments

  1. Kate M
    February 25, 2025

    I’m always on the hunt for a quick GF chocolate treat. This is an easy recipe and excellent muffins. I used less sugar, more maple syrup and subbed coconut oil for butter that also adds more sweetness. Topped with walnuts. Even my family who can have wheat are loving these. Will keep these on rotation – next time I’m icing them and passing off as cupcakes.5 stars

    Reply
    1. Claire Cary
      February 26, 2025

      Thank you, Kate! So glad you enjoyed these.

      Reply
claire cary

Welcome,
I’m Claire

Eat With Clarity is a place for gluten free recipes that are just as good as the real thing. With plenty of vegan, vegetarian and paleo options, there is something here for everyone!


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