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Meal Type ยป Desserts ยป Best Vegan Protein Cookies

Best Vegan Protein Cookies

Claire Cary

By

Claire Cary

5 from 19 votes
December 27, 2023
Jump to Recipe

These chewy chocolate chunk vegan protein cookies are the perfect low carb recipe when you’re craving something sweet! They’re grain free, paleo friendly and sweetened with just pure maple syrup.

vegan protein cookies stacked on each other with melted chocolate

You probably know this already, but I’m a wee bit chocolate chip cookie obsessed. I love a classic, with crispy edges, a rich buttery flavor and soft and gooey center.

But sometimes you need to satisfy your sweet tooth without the added fat and sugar. Which is why I love these vegan protein cookies and my protein mug cake so much.

They have 8 grams of protein per cookie, are sweetened with just pure maple syrup and naturally grain free, gluten free, vegan and paleo friendly.

Perfect for a healthy dessert, afternoon snack or packed into school lunches! Try my peanut butter chickpea blondies next!

Why you’ll love this recipe

  • 8 grams of protein per cookie
  • Vegan & gluten free
  • Paleo friendly
  • One bowl & easy to make
ingredients for the recipe in bowls

Key ingredients

Almond Flour. Almond flour will keep these cookies grain free and help absorb the wet ingredients.

Protein Powder. I like using a vanilla pea protein powder with a bit of stevia in there to help sweeten the cookies further.

Vanilla or chocolate protein powder will work best, I don’t recommend plain since we aren’t adding a lot of sugar. Vanilla protein powder is usually stevia sweetened which helps with the flavor here.

Flax Egg. Since these cookies are vegan, we’ll be using one flax egg to bind all of the ingredients together.

Almond Butter. You can use any runny nut butter of choice, but I love the flavor of almond butter! Peanut butter will add a bit more protein than almond butter.

Maple syrup. Just 1/3 cup of pure maple syrup to sweeten these vegan protein cookies up! You don’t need any granulated or refined sugar here.

Coconut Oil. Coconut oil will work with the almond butter to keep the cookies nice and moist.

You can sub for vegan butter or regular butter as well. If you’re using coconut oil, make sure it is refined so there is no coconut flavor.

two images showing how to make the dough

How to make vegan protein cookies

Make flax eggs. Mix together the ground flax seeds with water and set aside.

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Whisk wet and dry. Whisk together all wet ingredients and the flax mixture once it has thickened. Fold in the dry ingredients aside from the chocolate

Chill. Fold in the chocolate chunks or chips. If the dough seems too wet, stick it in the fridge for about 20 minutes until it is easier to handle.

It will depend on the type of protein powder you used and how it absorbs ingredients.

dough scooped into balls

Scoop. Use a 2 tablespoon cookie scoop and scoop and place on a baking sheet lined with parchment paper. Press on a few extra chocolate chunks/chips on top.

Bake. Bake for 9-13 minutes. They will continue to harden as they cool.

Cool & serve. Remove from the oven and let cool completely before handling. Sprinkle with salt flakes and enjoy.

up close of the healthy vegan protein cookie with melted chocolate

How to store and freeze

Once prepared, these vegan protein cookies will keep for 3 days at room temperature or 5 days in the fridge. I like to warm them up in the microwave for a few seconds before eating!

They will firm up a bit in the fridge, but they will have the same delicious flavor.

You can freeze these cookies once they have baked. Just reheat at 325 Fahrenheit for a about five minutes or until warm through the center.

vegan protein cookies with a bite taken out

Ingredient tips

Nuts: Yes, you can sub the almond butter for sunflower seed butter or tahini and sub the almond flour for oat flour. I have not tested this myself, but these are generally pretty safe subs!

Protein powder: A lot of vegan protein powders are pea based, some are a blend with hemp protein as well. I recommend a vanilla flavor for best results. Heating protein powder will not destroy or denature the proteins.

Protein powder does not have the same attributes and absorbability as flour, so cannot be totally substituted for flour in baking. You’ll want to find a recipe that already calls for protein powder, like these cookies.

overhead shot of the vegan protein cookies with sea salt

Try these next!

  • Cake Batter Energy Bites
  • Paleo Chocolate Chunk Cookies
  • Banana Protein Muffins

Follow along on on instagram and subscribe to my email list for more recipes and updates. Leave a comment and rating below if you try this recipe and let us know how it turns out!

5 from 19 votes

Vegan Protein Chocolate Chip Cookies

by: claire cary

These chewy chocolate chunk vegan protein cookies are the perfect low carb recipe when you’re craving something sweet! They’re grain free, paleo friendly and sweetened with just pure maple syrup.
/ /
Prep: 10 minutes mins
Cook: 10 minutes mins
Total: 20 minutes mins
12

Ingredients

Wet:

  • 1 tablespoon ground flax seeds
  • 3 tablespoons water
  • ¼ cup melted refined coconut oil
  • ⅓ cup maple syrup
  • ⅓ cup runny almond or peanut butter
  • 1 teaspoon vanilla extract

Dry

  • 1 cup blanched almond flour
  • ⅓ cup protein powder
  • ½ teaspoon baking soda
  • ¼ teaspoon salt
  • 1 cup chocolate chunks or chips
US Customary – Metric

Instructions

  • Preheat the oven to 350 degrees Fahrenheit.
  • Whisk together the ground flax seeds with water and set aside.
  • Whisk together all wet ingredients. Whisk in the flax mixture once it has thickened.
  • Fold in the dry ingredients aside from the chocolate
  • Fold in the chocolate chunks or chips. If the dough seems too wet, stick it in the fridge for about 20 minutes until it is easier to handle. It will depend on the type of protein powder you used and how it absorbs ingredients.
  • Use a 2 tablespoon cookie scoop and scoop and place on a baking sheet lined with parchment paper. Press on a few extra chocolate chunks/chips on top.
  • Bake for 9-13 minutes. They will continue to harden as they cool.
  • Remove from the oven and let cool completely before handling. Sprinkle with salt flakes and enjoy.

Notes

To make these cookies nut free, sub the almond flour for oat flour and the almond butter for sunflower seed butter.
I recommend a vanilla protein powder for best results.
Serving: 1cookie / Calories: 236kcal / Carbohydrates: 18g / Protein: 8g / Fat: 15g / Fiber: 3g / Sugar: 12g

Did you make this?

Mention @eatwithclarity or tag #eatwithclarity!

Related posts:

  1. Protein Cookie Dough
  2. Peanut Butter Protein Balls
  3. Chocolate Protein Pudding
  4. Chocolate Protein Bliss Balls
5 from 19 votes (7 ratings without comment)

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Comments

  1. Amanda
    April 8, 2026

    Delicious!!5 stars

    Reply
  2. Kacia
    February 8, 2026

    These are amazing! You cannot tell they do not have eggs or sugar! My new favorite cookie!5 stars

    Reply
  3. Patty
    December 10, 2025

    These are AMAZING. The best vegan protein cookies Iโ€™ve had (and Iโ€™ve tried a LOT). ALSOโ€ฆI wonโ€™t gatekeep. Try these variations โ€“ they are DIVINE. LEMON POPPYSEED WHITE CHOCOLATE CHIP: Add 1 3/4tsp- 2tsp lemon extract, 1 tbsp poppyseeds and sub white chocolate chips for regular. CHOCOLATE PEPPERMINT: Swap chocolate protein for the vanilla, add 1/4tsp (and a little more to taste) of peppermint extract, 3 tbsp cocoa powder, and crushed candy canes on top. Took this variation to a holiday party and it was a hit! You can do so much with this recipe! Truly love โ€“ thank you!5 stars

    Reply
  4. Francesca Campbell
    November 17, 2025

    I really enjoyed making these Cookies, these are Delicious, I can not eat too many of these though as I am on Reduce food intake. I allowed my self Daily Treats Tho, because life would be boring otherwise. Thank You.5 stars

    Reply
  5. Trisha
    November 16, 2025

    Delicious โค๏ธ5 stars

    Reply
  6. Brittany
    July 19, 2025

    These tasted good but didnโ€™t turn out for me at all, they baked into a huge flat cookie that I ended up having to throw out. Bummer

    Reply
    1. Claire Cary
      July 21, 2025

      Sorry this recipe didn’t work out for you! Did you make any subs?

      Reply
  7. Elizabeth
    September 21, 2024

    Damn! These are good! I only had so much almond butter so I added pb. I wanted to use the leftover coconut from the milk I had made last week so I used some of that and some almond flour. These are great gluten free cookies and the protein powder excites me too! One didnโ€™t get a chance to firm up before I ate it. ๐Ÿคค5 stars

    Reply
  8. Sara
    July 3, 2024

    This recipe is amazing! Absolutely delicious. Thank you!5 stars

    Reply
  9. Brenda
    March 12, 2024

    So good! Thanks
    Changed the ingredients a bit but still yummy!5 stars

    Reply
    1. Claire Cary
      March 12, 2024

      Glad you loved these!

      Reply
  10. Leola
    March 11, 2024

    Absolutely delicious! I was worried at first when my first dozen cookies came out of the oven and seemed doughy on the inside, but after they cooled they are deliciously moist. I didnโ€™t have enough vanilla protein powder, so I used a peanut butter and vanilla. And I substituted an equal amount of applesauce for the coconut oil. I will definitely make the again!5 stars

    Reply
    1. Claire Cary
      March 11, 2024

      Delicious! So glad you enjoyed these.

      Reply
  11. Michelle
    March 4, 2024

    These cookies are sooo good! They came out soft and fluffy. I love the vanilla flavor from the protein powder. Iโ€™m on my second time making them in one week!5 stars

    Reply
    1. Claire Cary
      March 5, 2024

      Thank you, Michelle!

      Reply
  12. Michelle
    March 1, 2024

    I made these cookies today and I canโ€™t believe how good they are! They came out soft and fluffy. They taste great from the vanilla protein powder. These will definitely be on repeat. Iโ€™m wondering next time if I can replace 1/2 the oil for applesauce. I will try it out.5 stars

    Reply
    1. Claire Cary
      March 5, 2024

      Amazing! Let me know how it turns out with the apple sauce!

      Reply
  13. Haeda
    May 31, 2022

    Finally, a gf df chocolate chip protein cookie with just the textures I’ve been missing- a little chewy; crispy on the outside. Only modifications I made was to have the glycemic index modified, so halved the chips, and took the 1/3 cup of maple syrup and did 1/6 cup coconut sugar and 1/6 cup maple syrup instead. I used vanilla hemp protein powder for this (which had a tad bit of coconut sugar in it too). Fantastic recipe, thank you very much for sharingโค๏ธโฃ๏ธโœจ5 stars

    Reply
    1. Claire Cary
      June 6, 2022

      Thanks so much Haeda! So happy you enjoyed these cookies.

      Reply
  14. Margarita
    February 28, 2022

    Great recipe! Easy to make and very delicious!5 stars

    Reply
  15. clarisse carcao
    September 30, 2021

    Delicious! GREAT flavour, not dry, powdery or odd-tasting from the protein powder. I used mocha flavoured protein from VEGA and it was very good.5 stars

    Reply
    1. Claire Cary
      September 30, 2021

      Yum! Love the idea of the mocha protein, I’ll have to try that!

      Reply
claire cary

Welcome,
I’m Claire

Eat With Clarity is a place for gluten free recipes that are just as good as the real thing. With plenty of vegan, vegetarian and paleo options, there is something here for everyone!


Read Claire’s Story

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