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Meal Type » Gluten Free Snacks » Gluten Free Carrot Cake Muffins

Gluten Free Carrot Cake Muffins

Claire Cary

By

Claire Cary

5 from 43 votes
February 21, 2024
Jump to Recipe

Need a little pick me up?! These gluten free carrot cake muffins are moist, fluffy, and topped with a cinnamon streusel topping and maple cream cheese glaze. Made in just one bowl, healthy, and bursting with fresh carrot cake flavor.

two gluten free carrot cake muffins stacked on each other

Muffins are forever one of my favorite snacks because they’re basically like cupcakes, but it’s socially acceptable to eat them at any time of day. They’re an easy on the go breakfast, satisfying snack and are just sweet enough to pass as dessert.

These carrot cake muffins feature freshly grated carrots (which is super easy to do if you have a food processor), a mix of almond flour and gluten free all purpose flour, brown sugar and maple syrup for moisture and flavor, eggs, milk, oil and a whole lot of spices!

They’re topped with a four ingredient cinnamon streusel and finished off with a dairy free cream cheese glaze. Same flavor profile as my gluten free carrot cake cookies!

They truly couldn’t be more easy or delicious. I may or may not have eaten four in one day so I think that really speaks to how good they are, yeah?! You have the option to add chopped nuts, but apparently some people even like pineapple in carrot cake?! That’s a whole new world to me! If you love this recipe, try my almond flour banana muffins or carrot cake banana bread next!

ingredients in bowls with labels

How to make carrot cake muffins

Add the peeled carrots to a food processor and process until broken up and completely shredded. 

In a large mixing bowl, whisk together all wet ingredients until combined. Add in the dry ingredients aside from the nuts and carrots and mix well. 

Fold in the chopped walnuts and carrots until everything is well incorporated. The batter should be pretty thick at this point. Use a medium cookie scoop and add the batter to a lined cupcake/muffin tray. Fill about 3/4 of the way up.

two images showing how to make the batter

To make the streusel topping, add the softened butter, flour, sugar and cinnamon to a small bowl. Use a fork, your hands or a pastry cutter to combine the ingredients. It should be crumbly and on the drier side. If it seems too wet, add in a bit more flour. 

Use your fingers to crumble the streusel on top of the muffins. Add more than you think you should, the streusel will separate as the muffins bake. 

Bake at 425 for 2 minutes, then lower the temperature to 350 and bake for 16-20 more minutes. Careful not to over-bake, you don’t want them to become dry. Test them at 16 minutes, a toothpick should come out clean. 

Remove from the oven, let cool as is for 10 minutes, then remove the muffins from the tray and let finish cooling on a cooling rack. Once cool, whisk together the cream cheese and maple syrup and drizzle on top of the muffins. Try my gluten free carrot cake cupcakes next!

Overhead image of the muffins with streusel topping before going in the oven.

The key to a moist texture

Just because these healthy carrot cake muffins are gluten free doesn’t mean they have to be dry and bland, because I promise they aren’t!

The main ingredients in this recipe that keep the muffins moist are the oil, maple syrup, apple sauce, and non-dairy milk. I haven’t tested this recipe with any replacements, so I recommend sticking to those ingredients in the listed proportions for best results.

The other key is the amount of flour used and the bake time! Too much flour can yield muffins (and other baked goods) that are too dry and crumbly.

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However, the almond flour works to both keep the muffins moist and add structure, which is why we use it in addition to the gluten free all purpose flour.

Another thing to keep in mind is that the muffins will continue cooking even after you take them out of the oven.

The muffin tin will still be hot which can dry out the muffins if they’re left in for too long. My suggestion? Remove them and place on a cooling rack after about 10 minutes.

gluten free carrot cake muffins with the wrapper pulled off

Do you need to add xanthan gum to gluten free muffins?

Even though these muffins are gluten free, you don’t need to add any extra xanthan gum to the recipe.

I recommend sticking with the Bob’s Red Mill GF 1:1 Baking Flour, but if you use a different one just make sure it has xanthan gum in the mix. If you aren’t gluten free, just regular AP flour will work!

How to store

Once prepared, these muffins will store at room temperature for 3-5 days. Because of the apple sauce, they do need a little bit of air to breathe, so I recommend storing them in a tupperware container with the lid slightly ajar for best results.

carrot cake muffins stacked on a wire rack

Ingredient swaps

EGGS. You can sub the eggs for a vegan alternative, and flavor-wise they will be great, but the texture will be much more dense and the muffins won’t rise as much. I’d suggest either flax eggs or a store bought egg replacer like Bob’s Red Mill.

SUGAR. In most recipes you can use honey and maple syrup interchangeably, but I do not recommend using honey in these carrot cake muffins.

The maple syrup adds a bit more moisture than the honey and makes the final muffins a bit fluffier. If that’s all you have, you can get away with it, but keep in mind the batter will be a bit thicker and I suggest baking for 1-2 minutes less than recommended.

CARROTS. You can swap the fresh carrots for store bought grated carrots, but the texture and flavor is much better with fresh carrots, so I recommend this method. It’s super easy if you just use a food processor or a grater.

FLOUR. If you want to make these nut free, you can swap the 1 cup of almond flour for an additional 1/2 cup of gluten free all purpose flour. If you are not gluten free, simply swap the GF all purpose for regular all purpose flour.

gluten free carrot cake muffins with a bite taken out on parchment paper

Still hungry? Try these snacks next!

  • Gluten Free Blueberry Muffins
  • Gluten Free Banana Muffins
  • Blueberry Banana Bread
  • Gluten Free Banana Bread
  • Mini Chocolate Chip Muffins

Follow along on on instagram and subscribe to my email list for more recipes and updates. Leave a comment and rating below if you try this recipe and let us know how it turns out!

5 from 43 votes

Gluten Free Carrot Cake Muffins

by: claire cary

Need a little pick me up?! These carrot cake muffins are moist, fluffy, and topped with a cinnamon streusel topping and maple cream cheese glaze. Made in just one bowl, gluten free, and bursting with fresh carrot cake flavor.
/ /
Prep: 10 minutes mins
Cook: 20 minutes mins
Total: 30 minutes mins
12

Ingredients

Wet

  • ½ cup light brown sugar
  • ¼ cup maple syrup
  • ⅓ cup oil avocado, vegetable etc.
  • ¼ cup milk dairy or nondairy
  • 2 large eggs
  • 1 teaspoon vinegar I used apple cider
  • ⅓ cup apple sauce
  • 1 teaspoon vanilla

Dry:

  • 1 ½ cup gluten free all purpose baking flour
  • 1 cup blanched almond flour see notes for subs
  • 1 ½ teaspoon baking powder
  • 1 teaspoon baking soda
  • 1 teaspoon cinnamon
  • ½ teaspoon ginger
  • ½ teaspoon nutmeg
  • ¼ teaspoon cloves
  • ½ teaspoon salt
  • 1 ¼ cup fresh grated carrots about 2 large carrots
  • ½ cup finely chopped walnuts optional

Streusel:

  • 3 tablespoons gluten free all purpose baking flour
  • 3 tablespoons brown sugar
  • ½ teaspoon cinnamon
  • 1 ½ tablespoons softened butter or refined coconut oil

Cream Cheese Glaze:

  • 4 tablespoons plain cream cheese I used Kite Hill dairy free
  • 2-3 tablespoons maple syrup
US Customary – Metric

Instructions

  • Preheat the oven to 425 degrees Fahrenehit. 
  • Add the peeled and chopped carrots to a food processor and process until broken up and completely shredded. 
  • In a large mixing bowl, whisk together all wet ingredients until combined. 
  • Add in the dry ingredients aside from the nuts and carrots and mix well with a wooden spoon. Be sure to spoon and level the flour, don’t scoop right from the bag.
  • Fold in the chopped walnuts and carrots until everything is well incorporated. The batter should be pretty thick at this point, but that is key to a muffin with a nice round top!
  • Use a spoon or cookie scoop and add the batter to a lined cupcake/muffin tray. Fill about 3/4 of the way up.
  • To make the streusel topping, add the softened butter, flour, sugar and cinnamon to a small bowl.
  • Use a fork, your hands or a pastry cutter to combine the ingredients. It should be crumbly and on the drier side. If it seems too wet, add in a bit more flour. 
  • Use your fingers to crumble the streusel on top of the muffins. Add more than you think you should, the streusel will separate as the muffins bake. 
  • Bake at 425 for 2 minutes, then lower the temperature to 350 and bake for 16-20 more minutes. 
  • Careful not to over-bake, you don’t want them to become dry. Test them at 16 minutes, a toothpick should come out clean, but add about 2 more minutes at a time as needed. 15 is usually perfect in my oven!
  • Remove from the oven, let cool as is for 10 minutes, then remove the muffins from the tray and let finish cooling on a cooling rack. 
  • Once cool, whisk together the cream cheese and maple syrup and drizzle on top of the muffins.

Notes

You can use pre-shredded carrots from a bag if you prefer, but the texture and flavor is much better with fresh carrots, so I recommend this method.
You can sub the almond flour for oat flour, but cut back on the bake time by just 1-2 minutes since oat flour is more absorbent than almond.
You can sub the eggs for a vegan alternative, and flavor-wise they will be great, but the texture will be much more dense and the muffins won’t rise as much. I’d suggest either flax eggs or a store bought egg replacer like Bob’s Red Mill.
Serving: 1muffin / Calories: 276kcal / Carbohydrates: 37g / Protein: 5.1g / Fat: 12.3g / Fiber: 2g / Sugar: 16.4g

Did you make this?

Mention @eatwithclarity or tag #eatwithclarity!

Related posts:

  1. Vegan Gluten Free Banana Bread
  2. Almond Flour Banana Muffins
  3. Protein Banana Bread
  4. Strawberry Protein Energy Bites
5 from 43 votes (11 ratings without comment)

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Comments

  1. Linda
    August 5, 2024

    So delicious!5 stars

    Reply
  2. Rebecca
    March 31, 2024

    I took these to a church breakfast–they were a hit with my Celiac friends and disappeared. The texture was great, airy, moist and the crumble on top made them look so pretty! Be sure to whip the cream cheese and syrup at room temperature as I had trouble with drizzling with colder ingredients. The only addition a friend and I think would be good would be to add nutmeg and a little more cinnamon but they were delicious! Thank you.5 stars

    Reply
  3. Iris
    March 24, 2024

    I made these tonight without any toppings and they’re delicious. When I have more time I’ll make the cream cheese frosting. Looking forward to having this as my snack for the week!5 stars

    Reply
  4. Holly B
    March 3, 2024

    Love to give these more than 5 stars! I have a couple recipes for carrot muffins, but, as they were good, I wanted better. Came across yours. Other recipes are gone! These are So moist, So flavorful. Love all the spices. I used coconut sugar in place of the brown sugar. Turned out super. I did not even put on any toppings. I try to avoid to many sugars. Plus they did not need a topping to me. So delicious without. I know I will be making these weekly. Thank you so much for the great recipe.5 stars

    Reply
    1. Claire Cary
      March 5, 2024

      Thank you, Holly! So glad you found a recipe you love 🙂

      Reply
  5. DORIS
    February 21, 2024

    Super yummie and I keep making them for my sweetheart who is enjoying them every day! What would be the cooking times if I tried to make a loaf? I am hoping to make a larger quantity if possible and freeze to keep up with the demand! Thank you!5 stars

    Reply
    1. Claire Cary
      February 21, 2024

      Bake time would probably be close to an hour or so! Let me know if you try it out.

      Reply
  6. Veronica Kesner
    January 4, 2024

    Delicious muffins, really hit the spot! They are moist and fluffy, just the right amount of sweet.
    The glaze was amazing and I added a splash of bourbon and it was perfect!5 stars

    Reply
    1. Claire Cary
      January 5, 2024

      Love that addition! So glad you enjoyed these!

      Reply
  7. Julie
    January 3, 2024

    These are so delicious! I didn’t have applesauce and really wanted to make them, so I added the same amount of shredded apple by weight. It worked perfectly. They’re not too sweet which I love, and the combo of almond flour and gf flour makes for a really nice texture. I bake muffins (all gf) at least once a week and these are going into my rotation! Thank you!5 stars

    Reply
    1. Claire Cary
      January 4, 2024

      Oh amazing, so glad that worked as a sub! Thanks, Julie.

      Reply
    2. Peggy
      April 8, 2025

      Sounds delic can this be made in.a loaf pan if so what size thank you

      Reply
      1. Claire Cary
        April 8, 2025

        Yes, 9×5! I’d start with 50-55 minutes and go from there.

        Reply
  8. Melissa
    July 11, 2023

    Omg these were amazing and so pretty! I followed exactly as written (which was hard because I definitely like to scoop flour straight out of the bag 😂😂). I wouldn’t change a thing and will make these a lot!5 stars

    Reply
    1. Claire Cary
      July 14, 2023

      Amazing, thank you!

      Reply
  9. Joyce B.
    April 8, 2023

    Truly yummmmm! I made these into mini muffins for Easter…Made them exactly as written recipe. Baked at 400 in gas oven for 10 minutes…turned out simply awesome!5 stars

    Reply
    1. Claire Cary
      April 10, 2023

      Ohhh love the idea of mini muffins!

      Reply
  10. Siobhan
    March 19, 2023

    These are soo good! Nutritious but definitely taste like a treat. Mine were pretty big and they needed 18+ minutes to cook through. I was worried about overbaking them but they were still super moist. Definitely will be making these again soon – thank you!5 stars

    Reply
    1. Claire Cary
      March 20, 2023

      So happy you enjoyed this recipe!

      Reply
  11. Liesbeth
    March 17, 2023

    I never write reviews but this is truly the most perfect recipe. I made them as per recipe for my colleagues in work and they were amazed and telling me how it just ‘doesnt taste gluten free’ (as a compliment) 😀
    And for my kids substitute the sugar with banana and they absolutely love them.
    They are so fluffy and taste great. Thank you!!! Will be doing these all the time now5 stars

    Reply
    1. Claire Cary
      March 18, 2023

      Thank you so much! Just made my day 🙂

      Reply
  12. MRG
    February 11, 2023

    Absolutely delicious!! The perfect recipe… I have already shared it with my friends!5 stars

    Reply
    1. Claire Cary
      February 12, 2023

      Amazing, thanks for sharing!

      Reply
  13. Arlene
    October 2, 2021

    Great muffin. I just made the base muslin mix with out the toppings. I made it vegan with almond milk and coconut oil. Very good! Did not need to cook it the whole 14 minutes.
    Thanks!5 stars

    Reply
    1. Claire Cary
      October 4, 2021

      Delicious! Thanks Arlene.

      Reply
  14. Rachel
    March 8, 2021

    Absolutely loved this recipe! It was so fun to make and was a total crowd pleaser with friends and family! I typically don’t care for carrot cake myself, but these were hard to resist, especially with the cinnamon streusel and dairy free glaze!!5 stars

    Reply
    1. Claire Cary
      March 10, 2021

      So glad they were a hit! The streusel and glaze are my favorite part 🙂

      Reply
  15. Kat T
    August 11, 2020

    This is the first review I have ever left for anything before. This recipe is way too amazing to not say something! Perfection. I am new to a flexible but predominantly plant-based diet and I am so excited to have found the jackpot of recipes that are right up my alley! My husband moans and groans about eating healthy but he couldn’t keep his hands off of these! Can’t wait to try other recipes!5 stars

    Reply
    1. Claire Cary
      August 11, 2020

      Honored to be your first review! So happy you are all enjoying these! Thank you for the feedback 🙂

      Reply
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claire cary

Welcome,
I’m Claire

Eat With Clarity is a place for gluten free recipes that are just as good as the real thing. With plenty of vegan, vegetarian and paleo options, there is something here for everyone!


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