Healthy Banana Protein Muffins
These chocolate chip banana protein muffins are the ultimate meal prep snack. They’re healthy, sweetened with just honey, made with almond flour and ready in under 30 minutes.

I’ve been on a bit of a protein powder kick lately. I love adding it to smoothies of course, but lately I’ve been loving it in pancakes and now these banana protein muffins.
These muffins are the perfect recipe to have on hand for quick snacks, whether after school, post-workout or when the late night chocolate cravings hit.
Protein powder is great for baking because it can help turn a very non-nutritious recipe into a very nutritious one! As far as which one is best, I like pea protein, but if you are not dairy free, whey is great too!
They’re naturally gluten free, dairy free, oil free and ready to eat in about 30 minutes. Try my protein cookie dough, healthy chocolate chip cookies or protein overnight oats next!

How to make banana protein muffins
Preheat the oven to 350 degrees Fahrenheit. Line a muffin tin with 10 liners and set aside. In a large mixing bowl, whisk together all wet ingredients.
Whisk in the dry ingredients, aside from the chocolate or nuts if using. Fold in the nuts or chocolate chips.
Scoop into the prepared tray, filling each liner about 3/4 of the way up. Bake for 18-24 minutes or until a toothpick comes out clean. Remove from the oven and let cool completely before serving.

Key Ingredients & substitutions
Banana puree. This is one of the key ingredients that add moisture to these banana protein muffins and help naturally sweeten them. Be sure to use very ripe and spotty bananas and puree them instead of mash them. This is key for the texture- same with my mini banana muffins!
Almond & oat flour. We’re using half almond flour and half oat flour, but you are welcome to use all of one or the other if you prefer. The texture is best with half of each, but it will work with all of one. Same with my gluten free chocolate muffins!
Honey. Honey will help add some sweetness to the muffins without tons of added sugar. I have not tested these with maple syrup, but I imagine that would work as well.
Protein powder. I use a vanilla pea protein for this recipe, which I recommend. You can use other kinds of protein such as whey, but I recommend sticking with vanilla for the best flavor. You want to make sure it has stevia or some kind of sweetener for the best flavor. We’ll be using 1/2 cup of protein powder, which adds just the right amount of protein, but not so much that the texture is negatively impacted.
Eggs. The eggs help bind all of the ingredients together, add moisture and add some extra protein!
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Can you bake with protein powder?
Yes! I love adding protein powder into pancakes, baked protien oats, muffins, protein donuts, cookies and even chocolate cake. I don’t recommend adding it into a traditional recipe, it’s important to follow a recipe that already calls for protein powder for best results.
Protein powder sort of acts like flour in baked goods, it will absorb excess moisture and add structure. When used in the right amount, it will keep the recipe nice and fluffy and flavorful.

How to store and freeze
To store: Once prepared, these banana protein muffins will keep at room temperature for 3-5 days. I like to store them in a container or a ziplock bag to keep them moist.
To freeze: I have not tried freezing them, but I do think that would work well! Be sure to let them cool completely, then transfer to a freezer safe bag and freeze for up to 1 month.
To reheat: If frozen, let the muffins defrost in the fridge, then reheat until warm through the center at 300. If they were simply in the fridge or at room temp, just pop in the microwave for a few seconds to warm them up!

Can I make them vegan?
I have not tested these without the eggs, and to be honest, I don’t think the texture would turn out very well. If you do choose to make them vegan, my suggestion would be to use two flax eggs or add in an additional 1/2 cup of banana puree.
They won’t rise as much as they do with eggs or be quite as fluffy, but the flavor will still be delicious.

Try these next!
- Matcha Muffins
- Almond Flour Blueberry Muffins
- Gluten Free Zucchini Muffins
- Sweet Potato Muffins
- Gluten Free Banana Bread Cookies
- Carrot Cake Muffins
- Protein Brownies
- Gluten Free Pumpkin Muffins
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Banana Protein Muffins
by: claire cary
Ingredients
Wet
- 1 cup banana puree
- 2 eggs
- ¼ cup honey
- 1 teaspoon vanilla extract
Dry
- ½ cup blanched almond flour
- ½ cup oat flour
- ½ cup vanilla protein powder see notes
- 2 teaspoons baking powder
- ½ teaspoon cinnamon
- ¼ teaspoon salt
- ½ cup chocolate chips or chopped walnuts optional
Instructions
- Preheat the oven to 350 degrees Fahrenheit.
- Line a muffin tin with 10 liners and set aside. It helps to *also* spray the liners with oil as the protein powder can cause the batter to stick after baking.
- In a large mixing bowl, whisk together all wet ingredients.
- Whisk in the dry ingredients, aside from the chocolate or nuts if using.
- Fold in the nuts or chocolate chips.
- Scoop into the prepared tray, filling each liner about 3/4 of the way up.
- Bake for 18-24 minutes or until a toothpick comes out clean.
- Remove from the oven and let cool completely before serving.
Notes
Comments
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I have a milk and whey issue. Can I use egg white powder for protein powder? Recommendations??
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I use pea protein which I recommend! I link it in the recipe card.
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What if I don’t have almond flour?
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I suggest oat flour!
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Absolutely delicious. I used KOS vanilla protein powder and am so impressed by the taste and moist texture. Definitely my new go to.
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May I know approximately how much protein is there in one muffin?
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the nutrition info is at the bottom of the recipe card!
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These were delicious! Perfect snack for hiking the mountains of Arizona. I may have added a few extra tbsps of chocolate chunks 😀
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Love it! Thanks, Meghan!
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This is going to be my go to protein muffin recipe! Even my husband who has never enjoyed my healthy baking recipes loved these. I’ve only been using almond flour and if you add a little bit of coconut sugar it gives them an amazing flavor. Today I didn’t have ripe bananas so I tried wild blueberries instead, seemed to work pretty good!
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So glad you loved these, thanks Emily! Banana is a key ingredient here, so curious how it turned out without that!
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I made these muffins this morning and they came out great. I only had Oat Flour and used Ghost Whey Protein Chips Ahoy. Also used jumbo silicone muffin cups.
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Delish! Thanks, Kevin!
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These muffins are a staple in our household. This was the first recipe I made from your website and now I’ve made so many others. Thank you for creating healthier, delicious recipes!!
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Thank you, Lisa! Can’t wait to see what else you make!
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Do you think I could substitute the honey with Swerve sugar substitute? If so, what ratio would you use? Thanks!
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If you’re going to sub the honey you need to use a liquid sweetener! There are sugar free honey/maple syrup alternatives you can use in a 1:1 ratio.
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This was amazing! Nutritious, moist, delicious! Used 1/8 cup maple syrup instead of honey and used whey protein. Came out perfect! Definitely will make again. Thanks for the recipe!
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Thank you, so glad you enjoyed it!
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Can you make these without the vanilla extract?! So excited to try this out!
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Yeah should be ok!
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Can I use collagen powder in place of protein powder? I have the Vital Proteins one at home
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That should be ok, it will change the flavor a bit, and may not absorb wet ingredients as well, so keep an eye on the bake time.
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Not to be annoying, but I made modifications and it still turned out really well. I wanted to let people know what other adjustments they could make and the recipe would still work.
I used AP flour because that’s all I had. I used chocolate flavored protein powder (Kirkland brand) so I cut back on chocolate chips I put in. I did not use nuts.
Muffins still came out moist and fluffy. Would recommend trying this recipe even with AP flour. -
Can I use all almond flour instead of oat flour?
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Yes that should be fine!
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Simply amazing recipe! We are trying to be ultra conscious of what/how we eat and I used whatever I had on hand – agave syrup, GF AP flour (for the oat portion), super ripe bananas, and Sprout Living’s Vanilla Lacuma Pea Protein (stevia sweetened). Added some vanilla essence, nutmeg and sprinkled the tops with chopped walnuts. The taste and texture are both amazing! Thank you!!
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Love it! Thank you!
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