Healthy Banana Protein Muffins
These chocolate chip banana protein muffins are the ultimate meal prep snack. They’re healthy, sweetened with just honey, made with almond flour and ready in under 30 minutes.

I’ve been on a bit of a protein powder kick lately. I love adding it to smoothies of course, but lately I’ve been loving it in pancakes and now these banana protein muffins.
These muffins are the perfect recipe to have on hand for quick snacks, whether after school, post-workout or when the late night chocolate cravings hit.
Protein powder is great for baking because it can help turn a very non-nutritious recipe into a very nutritious one! As far as which one is best, I like pea protein, but if you are not dairy free, whey is great too!
They’re naturally gluten free, dairy free, oil free and ready to eat in about 30 minutes. Try my protein cookie dough, healthy chocolate chip cookies or protein overnight oats next!

How to make banana protein muffins
Preheat the oven to 350 degrees Fahrenheit. Line a muffin tin with 10 liners and set aside. In a large mixing bowl, whisk together all wet ingredients.
Whisk in the dry ingredients, aside from the chocolate or nuts if using. Fold in the nuts or chocolate chips.
Scoop into the prepared tray, filling each liner about 3/4 of the way up. Bake for 18-24 minutes or until a toothpick comes out clean. Remove from the oven and let cool completely before serving.

Key Ingredients & substitutions
Banana puree. This is one of the key ingredients that add moisture to these banana protein muffins and help naturally sweeten them. Be sure to use very ripe and spotty bananas and puree them instead of mash them. This is key for the texture- same with my mini banana muffins!
Almond & oat flour. We’re using half almond flour and half oat flour, but you are welcome to use all of one or the other if you prefer. The texture is best with half of each, but it will work with all of one. Same with my gluten free chocolate muffins!
Honey. Honey will help add some sweetness to the muffins without tons of added sugar. I have not tested these with maple syrup, but I imagine that would work as well.
Protein powder. I use a vanilla pea protein for this recipe, which I recommend. You can use other kinds of protein such as whey, but I recommend sticking with vanilla for the best flavor. You want to make sure it has stevia or some kind of sweetener for the best flavor. We’ll be using 1/2 cup of protein powder, which adds just the right amount of protein, but not so much that the texture is negatively impacted.
Eggs. The eggs help bind all of the ingredients together, add moisture and add some extra protein!
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Can you bake with protein powder?
Yes! I love adding protein powder into pancakes, baked protien oats, muffins, protein donuts, cookies and even chocolate cake. I don’t recommend adding it into a traditional recipe, it’s important to follow a recipe that already calls for protein powder for best results.
Protein powder sort of acts like flour in baked goods, it will absorb excess moisture and add structure. When used in the right amount, it will keep the recipe nice and fluffy and flavorful.

How to store and freeze
To store: Once prepared, these banana protein muffins will keep at room temperature for 3-5 days. I like to store them in a container or a ziplock bag to keep them moist.
To freeze: I have not tried freezing them, but I do think that would work well! Be sure to let them cool completely, then transfer to a freezer safe bag and freeze for up to 1 month.
To reheat: If frozen, let the muffins defrost in the fridge, then reheat until warm through the center at 300. If they were simply in the fridge or at room temp, just pop in the microwave for a few seconds to warm them up!

Can I make them vegan?
I have not tested these without the eggs, and to be honest, I don’t think the texture would turn out very well. If you do choose to make them vegan, my suggestion would be to use two flax eggs or add in an additional 1/2 cup of banana puree.
They won’t rise as much as they do with eggs or be quite as fluffy, but the flavor will still be delicious.

Try these next!
- Matcha Muffins
- Almond Flour Blueberry Muffins
- Gluten Free Zucchini Muffins
- Sweet Potato Muffins
- Gluten Free Banana Bread Cookies
- Carrot Cake Muffins
- Protein Brownies
- Gluten Free Pumpkin Muffins
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Banana Protein Muffins
by: claire cary
Ingredients
Wet
- 1 cup banana puree
- 2 eggs
- ¼ cup honey
- 1 teaspoon vanilla extract
Dry
- ½ cup blanched almond flour
- ½ cup oat flour
- ½ cup vanilla protein powder see notes
- 2 teaspoons baking powder
- ½ teaspoon cinnamon
- ¼ teaspoon salt
- ½ cup chocolate chips or chopped walnuts optional
Instructions
- Preheat the oven to 350 degrees Fahrenheit.
- Line a muffin tin with 10 liners and set aside. It helps to *also* spray the liners with oil as the protein powder can cause the batter to stick after baking.
- In a large mixing bowl, whisk together all wet ingredients.
- Whisk in the dry ingredients, aside from the chocolate or nuts if using.
- Fold in the nuts or chocolate chips.
- Scoop into the prepared tray, filling each liner about 3/4 of the way up.
- Bake for 18-24 minutes or until a toothpick comes out clean.
- Remove from the oven and let cool completely before serving.
Notes
Comments
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Do you know how much of the carbs is made up from sugar? or how I could work it out?
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About 10 grams!
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These muffins are absolutely delicious! I plan to keep them in my regular rotation. This is the best way to use a protein powder (whose flavor was too strong for my smoothie). Thank you!
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I made mine with a chocolate flavored protein powder I use, but otherwise, I followed the recipe. super yummy!
really only issue is I doubled the recipe and instead of making 20, it made 28! so it’s less protein in each muffin than I would like.
but still great! -
These are very good definitely will be making again!!! No substitutions. I’ve been looking for recipes with protein powder so I can add more protein to daily intake..
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My husband and I really like these muffins. I had to use flour instead of oat flour which I get hives from.
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Easy to make, lots of flavour. Will definitely be adding this recipe to my favs!
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I only had 1/4 cup banana but used 3/4 cup unsweetened applesauce as a replacement for the rest. so so good!
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Glad to know that worked out well!
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These came out really nice. I didn’t have flavored/sweetened protein powder. I did 1/3 cup honey and 2tsp vanilla to compensate. The muffins had enough flavor, and the texture was pretty good for not having regular flour. Will be making again.
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yummy! I forgot the cinnamon but they were still yummy. Making another batch to share with friends this time with cinnamon👍🏽
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These are by far the most amazing protein muffin recipes EVER. They taste like cupcakes and my entire family loves them. Can’t wait to try more of your recipes. 🥰
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Thank you, Amy! Can’t wait to see what else you make.
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Wow!! These muffins exceeded my expectations!
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I am usually scared to make recipes with protein powder due to the texture and taste, but WOW are these delicious! I can’t recommend them enough! I will definitely be remaking these. I subbed honey for maple syrup, only had oat flour (so used a full cup of that), and used Vega Protein + Greens vanilla protein powder. Also topped them each with a whole walnut and they look so cute 🙂
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Thank you, Misha! So glad you love them!
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I love them! Soft and juicy! Thank you!
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10/10, I do protein diets and this is an amazing recipe to make!
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SO YUMMY! Really quick, easy recipe with all clean ingredients! Highly recommend 🙂






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